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Welcome

  • Topics
  • Prerequisites
  • Organizers of this course
  • CSC services
  • Accounts and projects
  • Research use cases for Puhti

Supercomputer - intro

  • Why and how?
  • Supercomputer setup
  • CSC Supercomputers
  • Connecting to supercomputer
  • Exercise: Puhti web interface

GIS tools and data

  • GIS tools
  • Spatial data in Puhti
  • STAC
  • Exercise: STAC

Jobs

  • Batch jobs
  • Job monitoring

Run in parallel

  • Parallel computing
  • Exercise: GDAL
  • Parallel Python
  • Exercise: Python
  • Parallel R
  • Exercise: R

Data

  • Moving data
  • Best practice tips for data
  • Allas – object storage
  • Allas exercise

Installations

  • Installing own tools

Wrap-up

  • CSC support
  • Where to go from here
  • CSC and Unix cheatsheet
  • Terminal
  • .md

Where to go from here

Contents

  • Next steps
  • Training calendars
  • Self-study courses
  • Materials of past courses
  • Documentation

Where to go from here#

Next steps#

  • (Create or get access to a CSC project with your CSC user account)

  • Choose suitable service for your task

  • Sign-up for CSC gis-hpc mailing list

  • Ask for help if you need any, we don’t bite :)

Training calendars#

  • CSC

  • LUMI

Self-study courses#

  • Spatial data analysis with R

  • University of Helsinki: Automating GIS Processes (Python)

  • CSC computing environment

  • Elements of supercomputing

  • Research data management

Materials of past courses#

  • CSC geoinformatics training materials

  • Geocomputing seminars

  • LUMI training materials

  • CodeRefinery materials on FAIR research software development

Documentation#

  • CSC Docs

  • LUMI Docs

  • GIS:

    • Geocomputing examples in github

    • Tutorials in CSC Docs:

      • Earth Observation tutorial

      • GDAL tutorial

      • Virtual rasters

    • Python GIS learning materials

    • Spatial R learning materials

  • Linux:

    • CSC and Linux Cheat Sheet (one page summary of the most important Linux commands – handy to have near you during the course)

    • CSC Docs: Linux tutorial

    • CSC Docs: Bash tutorial

    • UNIX tutorial for beginners (the first two topics are a good start, try also some editor)

    • Basic Linux Commands 10 min tutorial video (sit back and watch)

    • Terminal basics

previous

CSC support

next

CSC and Unix cheatsheet

Contents
  • Next steps
  • Training calendars
  • Self-study courses
  • Materials of past courses
  • Documentation

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